BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB026G01SP1|AL428597
(893 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1349 993 0.0
>3x_Contig1349
Length = 5890
Score = 993 bits (492), Expect = 0.0
Identities = 519/534 (97%), Gaps = 1/534 (0%)
Strand = Plus / Minus
Query: 1 atctccaagaaacgcagcgttagaaatgctagccaaggatgctaccggagcgaacaacaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 538 atctccaagaaacgcagcgttagaaatgctagccaaggatgctaccggagcgaacaacaa 479
Query: 61 catcgcgcaacccgaatttttcgatgacagcttctttttcagtggtaatctaatatacaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 478 catcgcgcaacccgaatttttcgatgacagcttctttttcagtggtaatctaatatacaa 419
Query: 121 ctctgagttactcgaagaaaaaaacaacatcaccacgtcatgtgcccaaattgctcctcg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 418 ctctgagttactcgaagaaaaaaacaacatcaccacgtcatgtgcccaaattgctcctcg 359
Query: 181 taccatgaaagcaatttcttctaacgaattcaacatgaatccaaactctcattcgctcat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 358 taccatgaaagcaatttcttctaacgaattcaacatgaatccaaactctcattcgctcat 299
Query: 241 gcaatgggacgatatcccatatttyatgactacaaatytaaacccagatacaaatacaaa 300
|||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||
Sbjct: 298 gcaatgggacgatatcccatatttcatgactacaaatctaaacccagatacaaatacaaa 239
Query: 301 cacctcgccccaaatgtcagatacccaggacaccatgagaattaataacaacaacaacaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 238 cacctcgccccaaatgtcagatacccaggacaccatgagaattaataacaacaacaacaa 179
Query: 361 caacaacaacaacataccccaggcattgccatcattatygtcatcctcatcgtacatggr 420
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 178 caacaacaacaacataccccaggcattgccatcattatcgtcatcctcatcgtacatgga 119
Query: 421 gactgakatydaggcaatctacaaacaagtacaagattacatagtcctcctcgatagtrc 480
|||||| || ||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 118 gactgaaatcaaggcaatctacaaacaagtacaagattacatagtcctcctcgatagtac 59
Query: 481 cgacc-acgagctggrattbgtcgccagcgggaaatnanctascgagagtttga 533
||||| ||||||||| ||| |||||||||||||||| | ||| ||||| |||||
Sbjct: 58 cgaccaacgagctggaattcgtcgccagcgggaaatcacctaccgagactttga 5
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.40 0.714 1.33
Gapped
Lambda K H
1.40 0.714 1.33
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6451
Number of Sequences: 1807
Number of extensions: 6451
Number of successful extensions: 883
Number of sequences better than 1.0e-20: 1
length of query: 893
length of database: 10,358,551
effective HSP length: 16
effective length of query: 877
effective length of database: 10,329,639
effective search space: 9059093403
effective search space used: 9059093403
T: 0
A: 40
X1: 5 (10.1 bits)
X2: 14 (28.2 bits)
S1: 12 (24.7 bits)
S2: 50 (101.4 bits)